BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004D06SP1|AL425253
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1583 1749 0.0
>3x_Contig1583
Length = 12509
Score = 1749 bits (881), Expect = 0.0
Identities = 883/885 (99%)
Strand = Plus / Minus
Query: 1 gcttaccatttgtgaaaatctagcaggtttattgttattgatagagtgcttgttcctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7417 gcttaccatttgtgaaaatctagcaggtttattgttattgatagagtgcttgttcctctt 7358
Query: 61 ctaaaaccactaagttaaaagttaattaaaatctgatgaagttaacaataaggtttgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7357 ctaaaaccactaagttaaaagttaattaaaatctgatgaagttaacaataaggtttgaat 7298
Query: 121 tttgggtatacaaagtcaccttaaatgtccaaatgttgtcataactcaattgtgtaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7297 tttgggtatacaaagtcaccttaaatgtccaaatgttgtcataactcaattgtgtaaatt 7238
Query: 181 tatgctaccttgaagattaaataattaaatatctatacgtttcctacattctgccagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7237 tatgctaccttgaagattaaataattaaatatctatacgtttcctacattctgccagaat 7178
Query: 241 tgcccttgcttcttcaatctcctgagaagtaccgtgtataacaccatttgcatagttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7177 tgcccttgcttcttcaatctcctgagaagtaccgtgtataacaccatttgcatagttgta 7118
Query: 301 agcatctgaatagtttctgtgtttaaattcatgtttcgcgagccagagtttagctttgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7117 agcatctgaatagtttctgtgtttaaattcatgtttcgcgagccagagtttagctttgcc 7058
Query: 361 aatttcgtctatttgttgagccttcttaacctcatcaagttcaacgcacttggccatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7057 aatttcgtctatttgttgagccttcttaacctcatcaagttcaacgcacttggccatata 6998
Query: 421 atgtttacaagatgaaacgtcgttgttcttttcatgtagctttgccaacctgtaaagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6997 atgtttacaagatgaaacgtcgttgttcttttcatgtagctttgccaacctgtaaagaat 6938
Query: 481 agatatatcctgttcacctgataattgggatgaacgctggaaacacttgattgcttgtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6937 agatatatcctgttcacctgataattgggatgaacgctggaaacacttgattgcttgtac 6878
Query: 541 cgttttatctaatttttcgtaacaggatgcagacgcaaaccacattcttttatccaatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6877 cgttttatctaatttttcgtaacaggatgcagacgcaaaccacattcttttatccaatgg 6818
Query: 601 cttcaaagcgcatgccttttggaaatagtacaaagcaaaggaatgtttatctaamacttc 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6817 cttcaaagcgcatgccttttggaaatagtacaaagcaaaggaatgtttatctaaaacttc 6758
Query: 661 atatgcttgtcctaatccgtaccaagcctggaaatctcttgggttcacatcggaagctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6757 atatgcttgtcctaatccgtaccaagcctggaaatctcttgggttcacatcggaagctct 6698
Query: 721 tctatagcattcaatggcagcatgtgagtttttcatctcgatgaactcatgccccatcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6697 tctatagcattcaatggcagcatgtgagtttttcatctcgatgaactcatgccccatcaa 6638
Query: 781 gatccaggcatgagtgtaagatttatcaagcattaatgctcttctaaaatataggataga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6637 gatccaggcatgagtgtaagatttatcaagcattaatgctcttctaaaatataggataga 6578
Query: 841 tttttcatgctgttgttttgaactaaagtaattkgcaattatgca 885
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6577 tttttcatgctgttgttttgaactaaagtaattggcaattatgca 6533
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6775
Number of Sequences: 1807
Number of extensions: 6775
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)